Wiki

Explorable Microscopy Wiki

Welcome!
We are working to define, create, extend, and document the full tool chain required to bring the ability to create, upload, and share high resolution explorable images at the macro, micro, and nano scales to the widest audience. While we work to make the process as easy, intuitive, and efficient as possible we have setup and made the following devices, software, and documentation available. 


The project and work presented here builds upon the Global Connections Project and GigaPan.org at Carnegie Mellon University. For complete information about GigaPan and its mission, visit the site at http://www.gigapan.org/



What is a Microscopic Gigapixel Image?
gigapixel image is typically made up of a 2-dimensional mosaic of images. The images are individually taken to cover the entire subject area to be photographed and then stitched together to make a seamless image. For microscopic work, we add a third dimension to the process in order to obtain the full depth of field of an object. For a microscopic gigapixel image, you may need to take anywhere from 50 images to 50,000 images to get the detail and resolution you desire. It all depends on the size of your subject, the camera resolution, and the lens magnification you are using.

How Do I Make One and What Tools do I Need?

The basic process involves...

1. Capturing the Images. For the most efficient methods, use an automated motion control device and camera system, and automation software. Devices and software that we use are outlined below.

2. Post-Processing the Images. This involves focus stacking the images, stitching the images, and rendering a seamless image. Your final image is typically quite large and may be difficult to manage. But there is a solution for that in step three. The software and process is outlined in our Open Source Capture Software Page. 

3. Uploading the Image to GigaPan.org. This allows you to view and share your imagery with others without the need for a high powered computer or fancy programming. 

Complete details on this process are included on the Capture Software and Process Page.